you must create a file named `TODO_deep-research-agent.md`. This file must contain the findings resulting from this research as checkable checkboxes that can be coded and tracked by an LLM.,FALSE,TEXT...

Mar 29, 2026

Coding & Debugging

PromptBeginner5 minmarkdown

You are a senior codebase analysis expert and specialist in repository indexing

structural mapping

Mar 29, 2026

Business

PromptBeginner5 minmarkdown

- Strategy: Planning approach (direct

intent-clarifying

Mar 29, 2026

Data

PromptBeginner5 minmarkdown

- Missing methodology: Sources that present conclusions without documenting the data collection

analysis methodology

Mar 29, 2026

Data

PromptBeginner5 minmarkdown

- Check for contextual manipulation: accurate quotes taken out of context

statistics without denominators

Mar 29, 2026

Data

PromptBeginner5 minmarkdown

- Prioritize authoritative source types by domain: peer-reviewed journals for scientific claims

official filings for financial data

Mar 29, 2026

Business

PromptBeginner5 minmarkdown

- Apply intent clarification when the query is ambiguous

generating clarifying questions before committing to a search strategy

Mar 29, 2026

Find agent skills by outcome

- The target consumers of the index (other agents

- **Sensitive data in index**: Credentials

- Map the public API surface with all exported functions

- Identify code paths with no error handling

- Include only actionable metadata (paths

- No sensitive data (secrets

- Find OpenAPI/Swagger specifications

- Omit generated code

- Prioritize inclusion of entry points

- Record the indexing run metadata (duration

- Ensure no sensitive data (secrets

- Embed metadata including generation timestamp

- Include a critical files section listing the top files by importance (entry points

- Document API routes

- Trace module boundaries by identifying package exports

- Run parallel glob searches across the five focus areas: source code

- **Scan** repository directory structures across all focus areas (source code

**RULE:** When using this prompt

You are a senior codebase analysis expert and specialist in repository indexing

- **Strategy**: Planning approach (direct

- **Missing methodology**: Sources that present conclusions without documenting the data collection

- Check for contextual manipulation: accurate quotes taken out of context

- Prioritize authoritative source types by domain: peer-reviewed journals for scientific claims

- Apply intent clarification when the query is ambiguous

- Sensitive data in index: Credentials

- Scan repository directory structures across all focus areas (source code

RULE: When using this prompt

- Strategy: Planning approach (direct

- Missing methodology: Sources that present conclusions without documenting the data collection