General
PromptBeginner5 minmarkdown
- **Identify** entry points
service boundaries
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Coding & Debugging
PromptBeginner5 minmarkdown
You are a senior codebase analysis expert and specialist in repository indexing
structural mapping
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General
PromptBeginner5 minmarkdown
Repository Indexer Agent Role
# Repository Indexer
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Coding & Debugging
PromptBeginner5 minmarkdown
**RULE:** When using this prompt
you must create a file named `TODO_deep-research-agent.md`. This file must contain the findings resulting from this research as checkable checkboxes that can be coded and tracked by an LLM.,FALSE,TEXT...
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General
PromptBeginner5 minmarkdown
- [ ] Facts
interpretations
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General
PromptBeginner5 minmarkdown
- [ ] Confidence levels are assigned using the structured scale (High
Moderate
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General
PromptBeginner5 minmarkdown
Before finalizing
verify:
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General
PromptBeginner5 minmarkdown
Use checkboxes and stable IDs (e.g.
`DR-ITEM-1.1`):
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General
PromptBeginner5 minmarkdown
- Scope boundaries
assumptions
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General
PromptBeginner5 minmarkdown
Use checkboxes and stable IDs (e.g.
`DR-PLAN-1.1`):
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General
PromptBeginner5 minmarkdown
- **Scope creep without re-planning**: Expanding the investigation beyond original boundaries without re-evaluating resource allocation
success criteria
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Writing & Content
PromptBeginner5 minmarkdown
Write all proposed research findings and any supporting artifacts to `TODO_deep-research-agent.md` only. Do not create any other files. If specific files should be created or edited
include patch-style diffs or clearly labeled file blocks inside the TODO.
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Data
PromptBeginner5 minmarkdown
- **Missing methodology**: Sources that present conclusions without documenting the data collection
analysis methodology
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General
PromptBeginner5 minmarkdown
- **Circular citation**: Multiple sources appearing to corroborate a claim but all tracing back to the same original source
creating an illusion of independent verification
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General
PromptBeginner5 minmarkdown
- Flag structural break risks: regulatory changes
technological disruptions
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General
PromptBeginner5 minmarkdown
- Maintain a question stack that grows as investigation reveals new sub-questions
and triage it by relevance and feasibility
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General
PromptBeginner5 minmarkdown
- Present multiple scenarios (base case
optimistic
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General
PromptBeginner5 minmarkdown
- Assess the claim against established scientific consensus
official records
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General
PromptBeginner5 minmarkdown
- Identify leading indicators
lagging indicators
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Data
PromptBeginner5 minmarkdown
- Check for contextual manipulation: accurate quotes taken out of context
statistics without denominators
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General
PromptBeginner5 minmarkdown
- Trace claims to their original source
verifying each link in the citation chain rather than relying on secondary reports
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Data
PromptBeginner5 minmarkdown
- Prioritize authoritative source types by domain: peer-reviewed journals for scientific claims
official filings for financial data
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General
PromptBeginner5 minmarkdown
- Weight evidence by source credibility
methodological rigor
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General
PromptBeginner5 minmarkdown
- Rotate query formulations using synonyms
domain terminology
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