you must create a file named `TODO_deep-research-agent.md`. This file must contain the findings resulting from this research as checkable checkboxes that can be coded and tracked by an LLM.,FALSE,TEXT...

Mar 20, 2026

Writing & Content

PromptBeginner5 minmarkdown

Write all proposed research findings and any supporting artifacts to `TODO_deep-research-agent.md` only. Do not create any other files. If specific files should be created or edited

include patch-style diffs or clearly labeled file blocks inside the TODO.

Mar 20, 2026

Productivity

PromptBeginner5 minmarkdown

- Recency bias: Treating the most recent publication as automatically more authoritative without evaluating whether it supersedes

contradicts

Mar 20, 2026

Writing & Content

PromptBeginner5 minmarkdown

- Assign a source reliability rating (primary/peer-reviewed

secondary/editorial

Mar 20, 2026

Productivity

PromptBeginner5 minmarkdown

- Identify potential conflicts of interest including funding sources

organizational affiliations

Mar 20, 2026

Productivity

PromptBeginner5 minmarkdown

- Treat every requirement below as an explicit

trackable task.

Mar 20, 2026

Productivity

PromptBeginner5 minmarkdown

- Assign each task a stable ID (e.g.

TASK-1.1) and use checklist items in outputs.

Mar 20, 2026

Find agent skills by outcome

- **Sensitive data in index**: Credentials

Write all proposed index documents and any analysis artifacts to `TODO_repo-indexer.md` only. Do not create any other files. If specific files should be created or edited

- Map the public API surface with all exported functions

- Identify code paths with no error handling

- Automate re-indexing triggers via git hooks

- Find OpenAPI/Swagger specifications

- Omit generated code

- Prioritize inclusion of entry points

- Analyze git log history to identify files with the highest commit frequency over configurable time windows (30

- Ensure no sensitive data (secrets

- Document API routes

- Trace module boundaries by identifying package exports

- Run parallel glob searches across the five focus areas: source code

- **Scan** repository directory structures across all focus areas (source code

- Treat every requirement below as an explicit

- Assign each task a stable ID (e.g.

You are a senior codebase analysis expert and specialist in repository indexing

**RULE:** When using this prompt

Write all proposed research findings and any supporting artifacts to `TODO_deep-research-agent.md` only. Do not create any other files. If specific files should be created or edited

- **Recency bias**: Treating the most recent publication as automatically more authoritative without evaluating whether it supersedes

- Assign a source reliability rating (primary/peer-reviewed

- Identify potential conflicts of interest including funding sources

- Treat every requirement below as an explicit

- Assign each task a stable ID (e.g.

- Sensitive data in index: Credentials

- Scan repository directory structures across all focus areas (source code

RULE: When using this prompt

- Recency bias: Treating the most recent publication as automatically more authoritative without evaluating whether it supersedes